jacobian

Acquisitions

Here are three examples of our functional image processing capabilities. See the captions for where to find more information about each method in the drop-down menus below.

functional slice

Resting-state BOLD

See: INPC Functional Pipeline, Resting-state Connectivity
functional slice

Task-related BOLD

See: INPC Functional Pipeline, Single-trial Beta Deconvolution
ASL map

Arterial Spin Labeling

See: ASL Perfusion Map

BOLD: Blood Oxygen Level-Dependent

Resting-state BOLD: imaging a brain at rest
Task-related BOLD: imaging an engaged brain

Functional Outcomes

INPC standard functional processing of resting-state and task-related BOLD data, including: 

  • Motion correction
  • Normalization
  • One-step nuisance regression

Voxel-wise connectivity mapping to a single region of interest.

Whole-brain connectivity matrix for atlas-defined ROIs.

Deconvolution of task-based fMRI methods, including:

  • LSS (least squares separate) or LSA (least squares all) methods
  • Pending upgrades to include:
    • Robust regression
    • Linear mixed effects modelling
    • Robust mixed effects regression

CUSTOM FUNCTIONAL ADD-ONS AND fMRIPREP TBD

This tool provides:

  • Processing of Arterial Spin Labeling data
  • Registerting to native and normal space
MORE ABOUT METHODS